Grant Detail
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Genetic Influences on Coronary Artery Calcification
1 September 2007 - 30 June 2011
NATIONAL HEART, LUNG, AND BLOOD INSTITUTE
[unreadable] The overall objective of this proposal is to identify genes that influence susceptibility to cardiovascular disease through their influence on levels of coronary artery calcification (CAC). The presence and quantity of CAC predicts risk of future CVD events and levels of CAC are highly heritable. This proposal takes advantage of two large cohorts of individuals who have been phenotyped for CAC using EBCT technology and recent advances in genomics that make feasible the identification of disease susceptibility genes through genome-wide association (GWA) approaches. We hypothesize that genes influencing variation in CAC will be readily identified through GWA analysis with densely spaced SNPs. To test this hypothesis, we will carry out a 2-stage design in which we will first screen 800 Amish subjects using a GWA scan (Stage I), and then genotype associated SNPs in a second (Stage II) population of European Caucasian ancestry individuals from Rochester, MN from the Epidemiology of Coronary Artery Calcification Study. The Amish are a particular advantageous population to carry out such studies because of their common genetic ancestry and homogenous lifestyle. Through previous work, we have measured CAC in 800 Amish adults, in whom we are currently genotyping 500K Affymetrix SNP chips as part of other studies. In Specific Aim 1, we will genotype the remaining 300 subjects and carry out a GWA analysis of CAC. In Specific 2, we will identify the 1,750 most significantly associated SNPs from Stage 1 (representing 0.35% of the total number of SNPs tested) and will genotype these, as well as two flanking SNPs for each, in 900 subjects from the ECAC Study. Following these analyses, we will (as Specific Aim 3), prioritize the most compelling positional candidate genes and perform exhaustive analysis for sequence variation followed by association analysis to identify the most likely causative SNPs/haplotypes. Discovery of CAC susceptibility genes will provide: (i) critical insights into molecular mechanisms;(ii) new targets for therapy;(ii) blood tests for early detection of at risk persons so that preventive interventions can be instituted. This will impact substantially on mortality, quality of life, and health care costs for millions of middle-aged and elderly Americans. [unreadable] [unreadable] [unreadable]
28 Resulting Publications
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1.
2013Richard B Horenstein; Braxton D Mitchell; Wendy S Post; Dieter Lütjohann; Klaus von Bergmann; Kathleen A Ryan; Michael Terrin; Alan R Shuldiner; Nanette I Steinle
Arteriosclerosis, thrombosis, and vascular biology 2013;33(2):413-9. -
2.
2012Folkert W Asselbergs; Yiran Guo; Erik P A van Iperen; Suthesh Sivapalaratnam; Vinicius Tragante; Matthew B Lanktree; Leslie A Lange; Berta Almoguera; Yolande E Appelman; John Barnard; et al.
Large-scale gene-centric meta-analysis across 32 studies identifies multiple lipid loci.
American journal of human genetics 2012;91(5):823-38. -
3.
2012Robert A Scott; Vasiliki Lagou; Ryan P Welch; Eleanor Wheeler; May E Montasser; Jian'an Luan; Reedik Mägi; Rona J Strawbridge; Emil Rehnberg; Stefan Gustafsson; et al.
Nature genetics 2012;44(9):991-1005. -
4.
2012Hou-Feng Zheng; Jon H Tobias; Emma Duncan; David M Evans; Joel Eriksson; Lavinia Paternoster; Laura M Yerges-Armstrong; Terho Lehtimäki; Ulrica Bergström; Mika Kähönen; et al.
PLoS genetics 2012;8(7):e1002745. -
5.
2012Karol Estrada; Unnur Styrkarsdottir; Evangelos Evangelou; Yi-Hsiang Hsu; Emma L Duncan; Evangelia E Ntzani; Ling Oei; Omar M E Albagha; Najaf Amin; John P Kemp; et al.
Nature genetics 2012;44(5):491-501. -
6.
2012Joanne M Murabito; Charles C White; Maryam Kavousi; Yan V Sun; Mary F Feitosa; Vijay Nambi; Claudia Lamina; Arne Schillert; Stefan Coassin; Joshua C Bis; et al.
Circulation. Cardiovascular genetics 2012;5(1):100-12. -
7.
2012Cristian Pattaro; Anna Köttgen; Alexander Teumer; Maija Garnaas; Carsten A Böger; Christian Fuchsberger; Matthias Olden; Ming-Huei Chen; Adrienne Tin; Daniel Taliun; et al.
Genome-wide association and functional follow-up reveals new loci for kidney function.
PLoS genetics 2012;8(3):e1002584. -
8.
2012Braxton D Mitchell; Woei-Jyh Lee; Magdalena I Tolea; Kelsey Shields; Zahra Ashktorab; Laurence S Magder; Kathleen A Ryan; Toni I Pollin; Patrick F McArdle; Alan R Shuldiner; et al.
Living the good life? Mortality and hospital utilization patterns in the Old Order Amish.
PloS one 2012;7(12):e51560. -
9.
2011Christian Gieger; Aparna Radhakrishnan; Ana Cvejic; Weihong Tang; Eleonora Porcu; Giorgio Pistis; Jovana Serbanovic-Canic; Ulrich Elling; Alison H Goodall; Yann Labrune; et al.
New gene functions in megakaryopoiesis and platelet formation.
Nature 2011;480(7376):201-8. -
10.
2011Georg B Ehret; Patricia B Munroe; Kenneth M Rice; Murielle Bochud; Andrew D Johnson; Daniel I Chasman; Albert V Smith; Martin D Tobin; Germaine C Verwoert; et al.
Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk.
Nature 2011;478(7367):103-9. -
11.
2011Tuomas O Kilpeläinen; M Carola Zillikens; Alena Stančákova; Francis M Finucane; Janina S Ried; Claudia Langenberg; Weihua Zhang; Jacques S Beckmann; Jian'an Luan; Liesbeth Vandenput; et al.
Genetic variation near IRS1 associates with reduced adiposity and an impaired metabolic profile.
Nature genetics 2011;43(8):753-60. -
12.
2011Carsten A Böger; Ming-Huei Chen; Adrienne Tin; Matthias Olden; Anna Köttgen; Ian H de Boer; Christian Fuchsberger; Conall M O'Seaghdha; Cristian Pattaro; Alexander Teumer; et al.
CUBN is a gene locus for albuminuria.
Journal of the American Society of Nephrology : JASN 2011;22(3):555-70. -
13.
2011Elizabeth K Speliotes; Laura M Yerges-Armstrong; Jun Wu; Ruben Hernaez; Lauren J Kim; Cameron D Palmer; Vilmundur Gudnason; Gudny Eiriksdottir; Melissa E Garcia; Lenore J Launer; et al.
PLoS genetics 2011;7(3):e1001324. -
14.
2010Haiqing Shen; Lawrence F Bielak; Jane F Ferguson; Elizabeth A Streeten; Laura M Yerges-Armstrong; Jie Liu; Wendy Post; Jeffery R O'Connell; James E Hixson; Sharon L R Kardia; et al.
Association of the vitamin D metabolism gene CYP24A1 with coronary artery calcification.
Arteriosclerosis, thrombosis, and vascular biology 2010;30(12):2648-54. -
15.
2010Cathy E Elks; John R B Perry; Patrick Sulem; Daniel I Chasman; Nora Franceschini; Chunyan He; Kathryn L Lunetta; Jenny A Visser; Enda M Byrne; Diana L Cousminer; et al.
Nature genetics 2010;42(12):1077-85. -
16.
2010Haiqing Shen; Coleen M Damcott; Evadnie Rampersaud; Toni I Pollin; Richard B Horenstein; Patrick F McArdle; Patricia A Peyser; Lawrence F Bielak; Wendy S Post; Yen-Pei C Chang; et al.
Archives of internal medicine 2010;170(20):1850-5. -
17.
2010Iris M Heid; Anne U Jackson; Joshua C Randall; Thomas W Winkler; Lu Qi; Valgerdur Steinthorsdottir; Gudmar Thorleifsson; M Carola Zillikens; Elizabeth K Speliotes; Reedik Mägi; et al.
Nature genetics 2010;42(11):949-60. -
18.
2010Elizabeth K Speliotes; Cristen J Willer; Sonja I Berndt; Keri L Monda; Gudmar Thorleifsson; Anne U Jackson; Hana Lango Allen; Cecilia M Lindgren; Jian'an Luan; Reedik Mägi; et al.
Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index.
Nature genetics 2010;42(11):937-48. -
19.
2010Hana Lango Allen; Karol Estrada; Guillaume Lettre; Sonja I Berndt; Michael N Weedon; Fernando Rivadeneira; Cristen J Willer; Anne U Jackson; Sailaja Vedantam; Soumya Raychaudhuri; et al.
Hundreds of variants clustered in genomic loci and biological pathways affect human height.
Nature 2010;467(7317):832-8. -
20.
2010Kiran Musunuru; Wendy S Post; William Herzog; Haiqing Shen; Jeffrey R O'Connell; Patrick F McArdle; Kathleen A Ryan; Quince Gibson; Yu-Ching Cheng; Elizabeth Clearfield; et al.
Circulation. Cardiovascular genetics 2010;3(5):445-53. -
21.
2010Yu-Ching Cheng; Wen-Hong L Kao; Braxton D Mitchell; A Richey Sharrett; Kathleen A Ryan; Robert A Vogel; Alan R Shuldiner; Toni I Pollin
Genetic effects on postprandial variations of inflammatory markers in healthy individuals.
Obesity (Silver Spring, Md.) 2010;18(7):1417-22. -
22.
2010Anna Köttgen; Cristian Pattaro; Carsten A Böger; Christian Fuchsberger; Matthias Olden; Nicole L Glazer; Afshin Parsa; Xiaoyi Gao; Qiong Yang; Albert V Smith; et al.
New loci associated with kidney function and chronic kidney disease.
Nature genetics 2010;42(5):376-84. -
23.
2009Yu-Ching Cheng; Wen-Hong L Kao; Braxton D Mitchell; Jeffrey R O'Connell; Haiqing Shen; Patrick F McArdle; Quince Gibson; Kathleen A Ryan; Alan R Shuldiner; Toni I Pollin
Circulation. Cardiovascular genetics 2009;2(4):329-37. -
24.
2009Nancy L Heard-Costa; M Carola Zillikens; Keri L Monda; Asa Johansson; Tamara B Harris; Mao Fu; Talin Haritunians; Mary F Feitosa; Thor Aspelund; Gudny Eiriksdottir; et al.
PLoS genetics 2009;5(6):e1000539. -
25.
2009Erin D Michos; Elizabeth A Streeten; Kathleen A Ryan; Evadnie Rampersaud; Patricia A Peyser; Lawrence F Bielak; Alan R Shuldiner; Braxton D Mitchell; Wendy Post
Calcified tissue international 2009;84(3):195-202. -
26.
2008Toni I Pollin; Coleen M Damcott; Haiqing Shen; Sandra H Ott; John Shelton; Richard B Horenstein; Wendy Post; John C McLenithan; Lawrence F Bielak; Patricia A Peyser; et al.
Science (New York, N.Y.) 2008;322(5908):1702-5. -
27.
2008Evadnie Rampersaud; Lawrence F Bielak; Afshin Parsa; Haiqing Shen; Wendy Post; Kathleen A Ryan; Patrick Donnelly; John A Rumberger; Patrick F Sheedy; Patricia A Peyser; et al.
American journal of epidemiology 2008;168(9):1016-23. -
28.
2008Evadnie Rampersaud; Braxton D Mitchell; Adam C Naj; Toni I Pollin
Investigating parent of origin effects in studies of type 2 diabetes and obesity.
Current diabetes reviews 2008;4(4):329-39.
Scientific Context
This section shows information that has been computed by using the fingerprint of the grant, including related publications, related experts and related grants - all with fingerprints representing significant amounts of overlap between their fingerprint and this grant. The red dots indicate whether those experts or terms actually appear within this grant, showing potential and actual connections.
Related Grants
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1.
Shuldiner, Alan R
Genome-wide Search for CVD Gene-Environment Interactions
30 September 2002 - 31 May 2009
NATIONAL HEART, LUNG, AND BLOOD INSTITUTE
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2.
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3.
Shuldiner, Alan R
MALDI-TOF MS for High Throughput SNP Analysis
1 May 2002 - 30 April 2003
NATIONAL CENTER FOR RESEARCH RESOURCES
Related Publications
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1.
2010Haiqing Shen; Coleen M Damcott; Evadnie Rampersaud; Toni I Pollin; Richard B Horenstein; Patrick F McArdle; Patricia A Peyser; Lawrence F Bielak; Wendy S Post; Yen-Pei C Chang; et al.
Archives of internal medicine 2010;170(20):1850-5. -
2.
2011Christopher J O'Donnell; Maryam Kavousi; Albert V Smith; Sharon L R Kardia; Mary F Feitosa; Shih-Jen Hwang; Yan V Sun; Michael A Province; Thor Aspelund; Abbas Dehghan; et al.
Circulation 2011;124(25):2855-64. -
3.
2008Allan F Moore; Kathleen A Jablonski; Jarred B McAteer; Richa Saxena; Toni I Pollin; Paul W Franks; Robert L Hanson; Alan R Shuldiner; William C Knowler; David Altshuler; et al.
Diabetes 2008;57(9):2503-10.
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Appears in this Publication
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Single Nucleotide Polymorphi...
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Genome Wide Association Stud...
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Genetic Predisposition to Di...
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European Continental Ancestr...
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